Table 2 The list of selected features of gene sets for comparison
From: Revealing Alzheimer’s disease genes spectrum in the whole-genome by machine learning
Feature | Source | Description |
|---|---|---|
Gene length | Ensembl [29] | Length of gene in bp |
Protein length | UniProt [30] | Length of protein in aa |
CDS length | Ensembl | Length of coding sequence in bp |
Length of 3’ UTR | Ensembl | Length of the 3′ untranslated region in bp |
Length of 5’ UTR | Ensembl | Length of the 5′ untranslated region in bp |
Transcript count | Ensembl | Transcript count in the gene |
Number of exons | Ensembl | Number of exons in the gene |
GC content | Ensembl | GC content (%) of gene |
Transmembrane domain | Ensembl | If the gene has a transmembrane domain |
Signal domain | Ensembl | If the gene has a signal domain |
Paralog | Ensembl | If the gene has a paralog in the human genome |