From: Revealing Alzheimer’s disease genes spectrum in the whole-genome by machine learning
Features | AD-associated dataset | Control dataset | AD-predicted dataset | Non-mental-health dataset | |
---|---|---|---|---|---|
Gene length (Mann-Whitney U test) | AD- associated set | – | < 2.2E-16 | 0.01607 | 0.002573 |
Control dataset | < 2.2E-16 | – | < 2.2E-16 | < 2.2E-16 | |
AD-predicted dataset | 0.01607 | < 2.2E-16 | – | 0.2018 | |
Non-mental-health dataset | 0.002573 | < 2.2E-16 | 0.2018 | – | |
Length of 3’ UTR (Mann-Whitney U test) | AD-associated set | – | < 2.2E-16 | 0.109 | 0.1131 |
Control dataset | < 2.2E-16 | – | < 2.2E-16 | < 2.2E-16 | |
AD-predicted dataset | 0.109 | < 2.2E-16 | – | 0.0003546 | |
Non-mental-health dataset | 0.1131 | < 2.2E-16 | 0.0003546 | – | |
Length of 5’ UTR (Mann-Whitney U test) | AD-associated dataset | – | 1.17E-13 | 0.4351 | 0.008426 |
Control dataset | 1.17E-13 | – | < 2.2E-16 | 3.05E-13 | |
AD-predicted dataset | 0.4351 | < 2.2E-16 | – | 0.000159 | |
Non-mental-health dataset | 0.008426 | 3.05E-13 | 0.000159 | – | |
Transcript count (Mann-Whitney U test) | AD-associated dataset | – | < 2.2E-16 | 0.2962 | 0.0006213 |
Control dataset | < 2.2E-16 | – | < 2.2E-16 | < 2.2E-16 | |
AD-predicted dataset | 0.2962 | < 2.2E-16 | – | 0.0006213 | |
Non-mental-health dataset | 0.0006213 | < 2.2E-16 | 0.0006213 | – | |
Number of exon (Mann-Whitney U test) | AD-associated dataset | – | < 2.2E-16 | 0.1314 | 0.3506 |
Control dataset | < 2.2E-16 | – | < 2.2E-16 | < 2.2E-16 | |
AD-predicted dataset | 0.1314 | < 2.2E-16 | – | 0.1537 | |
Non-mental-health dataset | 0.3506 | < 2.2E-16 | 0.1537 | – | |
Transmembrane domain (Chi-square test) | AD- associated set | – | 0.03783 | 0.8109 | 0.6143 |
Control dataset | 0.03783 | – | 0.01107 | 0.0448 | |
AD-predicted dataset | 0.8109 | 0.01107 | – | 0.302 | |
Non-mental-health dataset | 0.6143 | 0.0448 | 0.302 | – | |
Signal domain (Chi-square test) | AD- associated set | – | 3.70E-07 | 0.89 | 3.54E-05 |
Control dataset | 3.70E-07 | – | 1.20E-08 | 0.006176 | |
AD-predicted dataset | 0.89 | 1.20E-08 | – | 1.12E-08 | |
Non-mental-health dataset | 3.54E-05 | 0.006176 | 1.12E-08 | – | |
Paralog (Chi-square test) | AD- associated set | – | < 2.2E-16 | 0.05604 | 0.0007944 |
Control dataset | < 2.2E-16 | – | < 2.2E-16 | < 2.2E-16 | |
AD-predicted dataset | 0.05604 | < 2.2E-16 | – | 5.19E-13 | |
Non-mental-health dataset | 0.0007944 | < 2.2E-16 | 5.19E-13 | – |