SNP | Genotypes and alleles | Frequencies N (%) | OR (95% CI)a | P-value | HWE test for case | HWE test for controls | |
---|---|---|---|---|---|---|---|
Cases n = 360 | Control n = 342 | ||||||
rs11672433 | |||||||
Genotype | CC | 348 (96.7) | 278 (81.3) | 1.00 | 0.000 | 0.054 | |
CT | 6 (1.7) | 57 (16.7) | 0.15 (0.06–0.37) | 0.000 | |||
TT | 6 (1.7) | 7 (2.0) | 0.09 (0.02–0.52) | 0.007 | |||
CT + TT | 12 (3.3) | 64 (18.8) | 0.05 (0.02–0.11) | 0.000 | |||
Allele | C | 702 (97.5) | 613 (89.6) | 0.22 (0.13–0.38) | 0.000b | ||
T | 18 (2.5) | 71 (10.4) | |||||
rs4076317 | |||||||
Genotype | CC | 179 (49.7) | 154 (45.0) | 1.00 | 0.633 | 0.402 | |
CG | 147 (40.8) | 156 (45.6) | 0.84 (0.58–1.20) | 0.330 | |||
GG | 34 (9.4) | 32 (9.4) | 0.87 (0.47–1.61) | 0.662 | |||
CG + GG | 181 (50.3) | 188 (55.0) | 0.83 (0.58–1.19) | 0.317 | |||
Allele | C | 505 (70.1) | 464 (67.8) | 0.90 (0.72–1.13) | 0.351 b | ||
G | 215 (29.9) | 220 (32.2) | |||||
rs1044250 | |||||||
Genotype | CC | 315 (87.5) | 292 (85.4) | 1.00 | 0.001 | 0.165 | |
CT | 39 (10.8) | 46 (13.4) | 1.07 (0.60–1.90) | 0.814 | |||
TT | 6 (1.7) | 4 (1.2) | 2.82 (0.41–4.92) | 0.291 | |||
CT + TT | 45 (12.5) | 50 (14.6) | 1.01 (0.62–1.66) | 0.758 | |||
Allele | C | 669 (92.9) | 630 (92.1) | 0.89 (0.60–1.32) | 0.563 b | ||
T | 51 (7.1) | 54 (7.9) |